CDS

Accession Number TCMCG006C63004
gbkey CDS
Protein Id XP_013715519.1
Location complement(join(19288002..19288245,19288510..19289783))
Gene LOC106419303
GeneID 106419303
Organism Brassica napus

Protein

Length 505aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013860065.2
Definition F-box protein At5g06550-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category BT
Description Transcription factor jumonji aspartyl beta-hydroxylase (InterPro IPR003347), F-box domain, Skp2-like (InterPro IPR022364), Transcription factor jumonji (InterPro IPR013129)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000976        [VIEW IN EMBL-EBI]
GO:0000987        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010029        [VIEW IN EMBL-EBI]
GO:0010030        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018195        [VIEW IN EMBL-EBI]
GO:0018216        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034969        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0043985        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048582        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1900140        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGAACTCGCTGCTAGCCTCTCGTAACAGGCGGCGTAGATCCAAATCCAAATCCAAAAGACAAAAGCTCATTGAGAATCAACGTGAGCCTCAATGTCAAGAGACGGCACTAACAGAGGAAGAGGAAGAAGAAGATGAAGGAAACGGGTTCAAGCTCAAAACTTCAGCCAAGCACGGAGTCCAACCTCTCGGTAACCTCTACTTCGTCAACAAGGGCGCCGTCAACGTGCGAAACACCGGTCTAGGCAACCTCCATGTCCTCACCGACGAGCTCGTTTTAGAAATCCTAGCTCTCCTCGACGCGACCCATCTCGGCGTTTTATCCACCGTCACCAAATCCTTCTACGTATTCGCCAACCACGAGCCTCTCTGGAGAAACCTCGTCTTGGAAGAGCTAAAAGGAGACTTTTTGTTCGCCGGATCGTGGAAAGCCACCTATGTAGCTGCTTCCCATCCCAAGTTTCAGAGCTCTGGTGAATCTGTTTTGAAGATCAGAGATTTCTACTCTGATTACCTCTTCCAGAGCTGGCTATGCGCGAATCTCGAGATGAAACGGGAGTGGCTTGAACGAGATAACATCACCCGCGTGAGAGGCCTTTCCGTTGAAGACTTCATCACTAACTTCGAGGAACCGAATAAGCCTGTTTTATTGGAAGGGTGTTTGGATGACTGGGGTGCGGTTAAGAAATGGAGTAAAGAGTATCTGAGTGACGTGGCTGGTGACGTGGAGTTCGCTGTTGGTCCGGTTGAGATGAAGCTCGAGAACTACTTTAAGTACTCCGACGGAGTTACCGAGGAGAGGCCGTTGTACTTGTTTGATCCCAAGTTTGCTGAGAAAGTCCCCGTTTTGGATTCGGAGTATGAGGCTCCTGTTTATTTTAGAGAGGACTTGTTTAGTGTTTTGGGAAACGAGCGGCCTGATTATAGATGGATTATCATCGGACCGTCCGGGTCTGGTTCTTCTTTCCACATTGATCCTAACTCGACCTCTGCTTGGAACGCGGTGATCACGGGTTCGAAGAAGTGGGTTTTGTTCCCGCCGGATGTGGTTCCTCCGGGTGTGCATCCGAGTCCTGATGGAGCGGAGGTGGCGTGTCCTGTTTCGATAATGGAGTGGTTTATGAACTTTTATGGTGATACTAGGAGTTGGAAGAAGAGGCCTGTTGAGTGTGTGTGCAAAGCTGGGGAGGTGATGTTTGTTCCTAATGGATGGTGGCATCTGGTGATTAATTTGGAGGAATCTATTGCTATTACTCAGAACTATGTTAGCAGGAGGAATCTATTGAATGTGTTGGAGTTTCTGAAGAAACCAAACGCTAAAGAGCTAGTCTCAGGAACAAACGACAGAGAGAACTTGCATGACAAGTTCAAGAAGGCCATCGAAGAAGCCTACCCAGGAACCATCCAAGAGCTAGAGAAGAAAGCAGAAGAAAAGAGAATAGCAGAAGAACAAAAAGTCACTTTCTGGGACGCTGCAACAGATTCCAAATCTGGTGCCTTCAAGTTTTCTTTCTAA
Protein:  
MPNSLLASRNRRRRSKSKSKRQKLIENQREPQCQETALTEEEEEEDEGNGFKLKTSAKHGVQPLGNLYFVNKGAVNVRNTGLGNLHVLTDELVLEILALLDATHLGVLSTVTKSFYVFANHEPLWRNLVLEELKGDFLFAGSWKATYVAASHPKFQSSGESVLKIRDFYSDYLFQSWLCANLEMKREWLERDNITRVRGLSVEDFITNFEEPNKPVLLEGCLDDWGAVKKWSKEYLSDVAGDVEFAVGPVEMKLENYFKYSDGVTEERPLYLFDPKFAEKVPVLDSEYEAPVYFREDLFSVLGNERPDYRWIIIGPSGSGSSFHIDPNSTSAWNAVITGSKKWVLFPPDVVPPGVHPSPDGAEVACPVSIMEWFMNFYGDTRSWKKRPVECVCKAGEVMFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLEFLKKPNAKELVSGTNDRENLHDKFKKAIEEAYPGTIQELEKKAEEKRIAEEQKVTFWDAATDSKSGAFKFSF